BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A05SP1|AL428476
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1571 0.0
>3x_Contig1727
Length = 17872
Score = 1571 bits (790), Expect = 0.0
Identities = 797/802 (99%)
Strand = Plus / Plus
Query: 1 cccatttttttcaaagtttcaaccaaaattcgtttatcctcaggggaagatcttgcaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8339 cccatttttttcaaagtttcaaccaaaattcgtttatcctcaggggaagatcttgcaagc 8398
Query: 61 actctaagttttggaatcacacgcaacatttttttatatggtagctttctaaatgtcggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8399 actctaagttttggaatcacacgcaacatttttttatatggtagctttctaaatgtcggt 8458
Query: 121 ccttccattgcacattctggatcgttgtaaccctcttcggaaagaatattacagtttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8459 ccttccattgcacattctggatcgttgtaaccctcttcggaaagaatattacagtttctt 8518
Query: 181 gagatggctcttgcagttaaaatattgtcaccagtgaccatacgaacagtaacacctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8519 gagatggctcttgcagttaaaatattgtcaccagtgaccatacgaacagtaacacctgct 8578
Query: 241 ctttgacattgttccacggattccttaacaccttcacgtagkgaatcttgtagaccgacc 300
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 8579 ctttgacattgttccacggattccttaacaccttcacgtagtggatcttgtagaccgacc 8638
Query: 301 atagcatcaagggtcatgccttcgctggacaagttcttgtggtccaactcgtgacccata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8639 atagcatcaagggtcatgccttcgctggacaagttcttgtggtccaactcgtgacccata 8698
Query: 361 accagatctggtgaagctatcgaggggtccgtgctatctgcaaattccttgggaggccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8699 accagatctggtgaagctatcgaggggtccgtgctatctgcaaattccttgggaggccat 8758
Query: 421 tctttgaaatctctgtgaactagagagattgttctgagcgcatgagaggccatatcttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8759 tctttgaaatctctgtgaactagagagattgttctgagcgcatgagaggccatatcttga 8818
Query: 481 atctttttgaaggactcatcatataaatyctgattcattggtactattgagttgtcggag 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8819 atctttttgaaggactcatcatataaatcctgattcattggtactattgagttgtcggag 8878
Query: 541 tttctctggttagaacataccttcaataatatttcggcggcacctttggcataaaatcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8879 tttctctggttagaacataccttcaataatatttcggcggcacctttggcataaaatcta 8938
Query: 601 taccctttgttatccgctaactgaacagcaatagctccccattttctagaactttcaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8939 taccctttgttatccgctaactgaacagcaatagctccccattttctagaactttcaaaa 8998
Query: 661 ggaatgacctgcaccaccttatcaatacctaaatctgaaggtttagttctaagtttatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8999 ggaatgacctgcaccaccttatcaatacctaaatctgaaggtttagttctaagtttatgc 9058
Query: 721 acgtctttyatccctaaggatttctgagcaaatgccaacaatgccgtttcagttttagaa 780
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9059 acgtctttcatccctaaggatttctgagcaaatgccaacaatgccgtttcagttttagaa 9118
Query: 781 ccgagaaattkttcatcatttt 802
|||||||||| |||||||||||
Sbjct: 9119 ccgagaaattgttcatcatttt 9140
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5580
Number of Sequences: 1807
Number of extensions: 5580
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)